EnhancerDB
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  3. rs12598084[chr16:85473570]
Enhancers that have rs12598084[chr16:85473570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12598084[chr16:85473570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85470775 85477356 ZNF143 GTRD no Epithelial (MCF-7) 21725912
chr16 85470775 85477356 ZNF143 GTRD no Epithelial (MCF-7) 21725913
chr16 85470775 85477356 ZNF143 GTRD no Epithelial (MCF-7) 108214671
chr16 85470775 85477356 ZNF143 GTRD no Epithelial (MCF-7) 108214672
chr16 85470775 85477356 ZNF143 GTRD no Epithelial (MCF-7) 108214673
chr16 85471334 85473773 ZNF143 GTRD no Epithelial (MCF-7) 21725936
chr16 85471334 85473773 ZNF143 GTRD no Epithelial (MCF-7) 108214706
chr16 85471334 85473773 ZNF143 GTRD no Epithelial (MCF-7) 108214707
chr16 85471386 85475733 ZNF143 GTRD no Epithelial (MCF-7) 21725938
chr16 85471386 85475733 ZNF143 GTRD no Epithelial (MCF-7) 108214709
chr16 85471386 85475733 ZNF143 GTRD no Epithelial (MCF-7) 108214710
chr16 85471533 85477160 ZNF143 GTRD no Epithelial (MCF-7) 21725944
chr16 85471533 85477160 ZNF143 GTRD no Epithelial (MCF-7) 108214712
chr16 85471591 85474690 ZNF143 GTRD no Epithelial (MCF-7) 21725947
chr16 85471591 85474690 ZNF143 GTRD no Epithelial (MCF-7) 108214714
chr16 85471603 85474800 ZNF143 GTRD no Epithelial (MCF-7) 21725950
chr16 85471603 85474800 ZNF143 GTRD no Epithelial (MCF-7) 108214715
chr16 85471738 85474871 ZNF143 GTRD no Epithelial (MCF-7) 21725963
chr16 85471738 85474871 ZNF143 GTRD no Epithelial (MCF-7) 108214716
chr16 85472164 85474843 TCF7L2 GTRD no Colon (HCT116) 21725980
chr16 85472164 85474843 TCF7L2 GTRD no Colon (HCT116) 108214719
chr16 85472187 85474675 ZNF143 GTRD no Epithelial (MCF-7) 21725981
chr16 85472187 85474675 ZNF143 GTRD no Epithelial (MCF-7) 108214720
chr16 85472241 85474836 ZNF143 GTRD no Epithelial (MCF-7) 21725982
chr16 85472241 85474836 ZNF143 GTRD no Epithelial (MCF-7) 108214721
chr16 85472544 85474796 ZNF143 GTRD no Epithelial (MCF-7) 21725986
chr16 85472544 85474796 ZNF143 GTRD no Epithelial (MCF-7) 108214722
chr16 85473074 85473853 ZNF274 GTRD no Bone Marrow (K562) 21725988
chr16 85473074 85473853 ZNF274 GTRD no Bone Marrow (K562) 108214724
chr16 85473099 85473596 ZNF274 GTRD no Bone Marrow (K562) 21725989
chr16 85473099 85473596 ZNF274 GTRD no Bone Marrow (K562) 108214725
chr16 85473149 85473892 ZNF274 GTRD no Bone Marrow (K562) 21725990
chr16 85473149 85473892 ZNF274 GTRD no Bone Marrow (K562) 108214726
chr16 85473150 85474329 ZNF274 GTRD no Bone Marrow (K562) 21725991
chr16 85473150 85474329 ZNF274 GTRD no Bone Marrow (K562) 108214727
chr16 85473196 85474058 ZNF274 GTRD no Bone Marrow (K562) 21725992
chr16 85473196 85474058 ZNF274 GTRD no Bone Marrow (K562) 108214728
chr16 85473568 85473572 YY1 TRANSFAC yes 12061667
chr16 85473570 85473581 NFIL3 JASPAR yes 12061668
Genes associated with rs12598084[chr16:85473570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More