EnhancerDB
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  3. rs12600313[chr16:85364164]
Enhancers that have rs12600313[chr16:85364164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12600313[chr16:85364164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85362390 85366591 ZNF143 GTRD no Epithelial (MCF-7) 21723718
chr16 85363054 85365742 ZNF143 GTRD no Epithelial (MCF-7) 21723732
chr16 85363083 85364469 TCF7L2 GTRD no Colon (HCT116) 21723734
chr16 85363117 85364329 ZNF143 GTRD no Epithelial (MCF-7) 21723735
chr16 85363190 85364441 ZNF143 GTRD no Epithelial (MCF-7) 21723742
chr16 85363828 85364649 ZNF274 GTRD no Bone Marrow (K562) 21723757
chr16 85364077 85365647 TCF7L2 GTRD no Colon (HCT116) 21723758
chr16 85364158 85364167 ZEB1 JASPAR yes 12048563
chr16 85364161 85364166 USF2 TRANSFAC yes 12048564
Genes associated with rs12600313[chr16:85364164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More