EnhancerDB
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  3. rs12600416[chr17:41546558]
Enhancers that have rs12600416[chr17:41546558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41539589 41549375 enh17170
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs12600416[chr17:41546558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41546426 41550308 ZBTB33 GTRD no Lung (A549) 108261414
chr17 41546430 41550405 ZBTB33 GTRD no Lung (A549) 108261415
chr17 41546443 41550050 ZBTB33 GTRD no Lung (A549) 108261416
chr17 41546458 41546868 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261417
chr17 41546542 41546562 TP63 JASPAR yes 54351394
chr17 41546545 41546560 TP53 JASPAR yes 54351395
chr17 41546546 41546566 TP63 JASPAR yes 54351396
chr17 41546547 41546565 TP53 JASPAR yes 54351397
chr17 41546548 41546563 TP53 JASPAR yes 54351398
chr17 41546548 41546568 TP53 JASPAR yes 54351399
chr17 41546548 41546832 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261418
chr17 41546554 41546954 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760910
chr17 41546554 41546954 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261419
Genes associated with rs12600416[chr17:41546558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More