EnhancerDB
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  3. rs12600530[chr17:62158701]
Enhancers that have rs12600530[chr17:62158701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12600530[chr17:62158701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62158689 62158703 PLAG1 JASPAR yes 55275037
chr17 62158689 62158704 HNF4G JASPAR yes 55275038
chr17 62158690 62158704 PLAG1 JASPAR yes 55275039
chr17 62158698 62158708 ZNF740 JASPAR yes 55275040
chr17 62158698 62158713 ZIC3 JASPAR yes 55275041
Genes associated with rs12600530[chr17:62158701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More