EnhancerDB
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  3. rs12600623[chr17:57456292]
Enhancers that have rs12600623[chr17:57456292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs12600623[chr17:57456292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57456282 57456295 ZBTB18 JASPAR yes 55054811
chr17 57456283 57456295 PKNOX1 JASPAR yes 55054812
chr17 57456283 57456295 PKNOX2 JASPAR yes 55054813
chr17 57456284 57456293 SNAI2 JASPAR yes 55054814
chr17 57456284 57456294 FIGLA JASPAR yes 55054815
chr17 57456284 57456294 ID4 JASPAR yes 55054816
chr17 57456284 57456294 TCF3 JASPAR yes 55054817
chr17 57456284 57456294 TCF4 JASPAR yes 55054818
chr17 57456286 57456295 ZEB1 JASPAR yes 55054819
chr17 57456287 57456295 TBX5 JASPAR yes 55054820
Genes associated with rs12600623[chr17:57456292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More