EnhancerDB
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  3. rs12601084[chr17:55619474]
Enhancers that have rs12601084[chr17:55619474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55618678 55620173 vista705
VISTA
Transcript factors that have rs12601084[chr17:55619474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55619121 55619661 EP300 UCSC Txn Factor no Conserved 107688415
chr17 55619150 55619560 GATA2 UCSC Txn Factor no Conserved 107688416
chr17 55619249 55619569 JUND UCSC Txn Factor no Conserved 107688417
chr17 55619274 55619530 ATF1 UCSC Txn Factor no Conserved 107688418
chr17 55619282 55619499 FOSL2 UCSC Txn Factor no Conserved 107688419
chr17 55619436 55619760 CEBPB UCSC Txn Factor no Conserved 107688420
chr17 55619459 55619475 SOX8 JASPAR yes 16222
chr17 55619459 55619475 SOX8 JASPAR yes 54966800
Genes associated with rs12601084[chr17:55619474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More