EnhancerDB
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  3. rs12602089[chr17:39806805]
Enhancers that have rs12602089[chr17:39806805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs12602089[chr17:39806805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39806804 39806812 TBX5 JASPAR yes 54268411
chr17 39806804 39806824 RREB1 JASPAR yes 54268412
Genes associated with rs12602089[chr17:39806805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More