EnhancerDB
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  3. rs12602360[chr17:55485780]
Enhancers that have rs12602360[chr17:55485780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12602360[chr17:55485780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55485766 55485780 POU1F1 JASPAR yes 54951756
chr17 55485767 55485780 POU3F3 JASPAR yes 54951759
chr17 55485768 55485780 POU2F1 JASPAR yes 54951761
Genes associated with rs12602360[chr17:55485780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More