EnhancerDB
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  3. rs12602441[chr17:55613200]
Enhancers that have rs12602441[chr17:55613200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12602441[chr17:55613200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55613191 55613203 NHLH1 JASPAR yes 54965865
chr17 55613192 55613202 MSC JASPAR yes 54965866
chr17 55613196 55613211 HNF4G JASPAR yes 54965867
chr17 55613197 55613211 NR2F1 JASPAR yes 54965868
chr17 55613197 55613212 HNF4A JASPAR yes 54965869
Genes associated with rs12602441[chr17:55613200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More