EnhancerDB
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  3. rs12609340[chr19:2588554]
Enhancers that have rs12609340[chr19:2588554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2585524 2605695 enh17851
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12609340[chr19:2588554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2587257 2589135 ZBTB33 GTRD no Lung (A549) 108362820
chr19 2587329 2589072 ZNF274 GTRD no Liver (HepG2) 21837409
chr19 2587329 2589072 ZNF274 GTRD no Liver (HepG2) 108362821
chr19 2587395 2588930 ZNF274 GTRD no Liver (HepG2) 21837411
chr19 2587395 2588930 ZNF274 GTRD no Liver (HepG2) 108362823
chr19 2587653 2589141 ZNF143 GTRD no Epithelial (MCF-7) 108362824
chr19 2587723 2588890 ZBTB33 GTRD no Lung (A549) 108362825
chr19 2587792 2588923 ZNF274 GTRD no Liver (HepG2) 21837412
chr19 2587792 2588923 ZNF274 GTRD no Liver (HepG2) 108362826
chr19 2587841 2589165 ZNF274 GTRD no Liver (HepG2) 21837413
chr19 2587841 2589165 ZNF274 GTRD no Liver (HepG2) 108362827
chr19 2587845 2589105 ZNF274 GTRD no Liver (HepG2) 21837414
chr19 2587845 2589105 ZNF274 GTRD no Liver (HepG2) 108362828
chr19 2587873 2588700 ZNF274 GTRD no Liver (HepG2) 21837415
chr19 2587873 2588700 ZNF274 GTRD no Liver (HepG2) 108362829
chr19 2587879 2588663 ZBTB33 GTRD no Lung (A549) 108362830
chr19 2587898 2588885 ZBTB33 GTRD no Lung (A549) 108362833
chr19 2587903 2589030 ZNF274 GTRD no Cervix (HeLa-S3) 21837418
chr19 2587903 2589030 ZNF274 GTRD no Cervix (HeLa-S3) 108362834
chr19 2587915 2588975 ZNF274 GTRD no Liver (HepG2) 21837419
chr19 2587915 2588975 ZNF274 GTRD no Liver (HepG2) 108362835
chr19 2587926 2588948 ZNF274 GTRD no Liver (HepG2) 21837420
chr19 2587926 2588948 ZNF274 GTRD no Liver (HepG2) 108362837
chr19 2587926 2589023 ZBTB33 GTRD no Lung (A549) 108362838
chr19 2587935 2589045 ZNF274 GTRD no Liver (HepG2) 21837421
chr19 2587935 2589045 ZNF274 GTRD no Liver (HepG2) 108362839
chr19 2587936 2588970 ZNF274 GTRD no Liver (HepG2) 21837422
chr19 2587936 2588970 ZNF274 GTRD no Liver (HepG2) 108362840
chr19 2587944 2588858 ZBTB33 GTRD no Lung (A549) 108362841
chr19 2587947 2588835 ZNF274 GTRD no Liver (HepG2) 21837423
chr19 2587947 2588835 ZNF274 GTRD no Liver (HepG2) 108362842
chr19 2587947 2588961 ZNF143 GTRD no Epithelial (MCF-7) 108362843
chr19 2587948 2588953 ZBTB33 GTRD no Lung (A549) 108362844
chr19 2587950 2588751 ZBTB33 GTRD no Lung (A549) 108362845
chr19 2587952 2588906 ZNF274 GTRD no Liver (HepG2) 21837424
chr19 2587952 2588906 ZNF274 GTRD no Liver (HepG2) 108362846
chr19 2587952 2588943 ZNF274 GTRD no Liver (HepG2) 21837425
chr19 2587952 2588943 ZNF274 GTRD no Liver (HepG2) 108362847
chr19 2587957 2589020 ZNF274 GTRD no Liver (HepG2) 21837426
chr19 2587957 2589020 ZNF274 GTRD no Liver (HepG2) 108362848
chr19 2587978 2588750 ZNF274 GTRD no Liver (HepG2) 21837427
chr19 2587978 2588750 ZNF274 GTRD no Liver (HepG2) 108362849
chr19 2587979 2588895 ZNF274 GTRD no Liver (HepG2) 21837428
chr19 2587979 2588895 ZNF274 GTRD no Liver (HepG2) 108362850
chr19 2587981 2588905 ZNF274 GTRD no Cervix (HeLa-S3) 21837429
chr19 2587981 2588905 ZNF274 GTRD no Cervix (HeLa-S3) 108362851
chr19 2587988 2588955 ZNF274 GTRD no Cervix (HeLa-S3) 21837430
chr19 2587988 2588955 ZNF274 GTRD no Cervix (HeLa-S3) 108362852
chr19 2587990 2588976 ZNF274 GTRD no Liver (HepG2) 21837431
chr19 2587990 2588976 ZNF274 GTRD no Liver (HepG2) 108362853
chr19 2587991 2588856 ZBTB33 GTRD no Lung (A549) 108362854
chr19 2587999 2588902 ZNF143 GTRD no Epithelial (MCF-7) 108362855
chr19 2588002 2589025 ZNF143 GTRD no Epithelial (MCF-7) 108362856
chr19 2588006 2588883 ZNF143 GTRD no Epithelial (MCF-7) 108362857
chr19 2588010 2588734 ZBTB33 GTRD no Lung (A549) 108362858
chr19 2588014 2588866 ZNF143 GTRD no Epithelial (MCF-7) 108362859
chr19 2588014 2588881 ZNF274 GTRD no Liver (HepG2) 21837432
chr19 2588014 2588881 ZNF274 GTRD no Liver (HepG2) 108362860
chr19 2588014 2588910 ZNF143 GTRD no Epithelial (MCF-7) 108362861
chr19 2588014 2588968 ZBTB33 GTRD no Lung (A549) 108362862
chr19 2588037 2588649 SOX2 GTRD no Neural Stem Cells (H9) 21837433
chr19 2588037 2588649 SOX2 GTRD no Neural Stem Cells (H9) 108362863
chr19 2588042 2588996 ZNF274 GTRD no Liver (HepG2) 21837435
chr19 2588042 2588996 ZNF274 GTRD no Liver (HepG2) 108362865
chr19 2588043 2588594 ZNF143 GTRD no Epithelial (MCF-7) 108362866
chr19 2588046 2588880 ZBTB33 GTRD no Lung (A549) 108362867
chr19 2588053 2588618 ZNF274 GTRD no Liver (HepG2) 21837436
chr19 2588053 2588618 ZNF274 GTRD no Liver (HepG2) 108362868
chr19 2588053 2588732 ZNF274 GTRD no Liver (HepG2) 21837437
chr19 2588053 2588732 ZNF274 GTRD no Liver (HepG2) 108362869
chr19 2588063 2588801 ZNF274 GTRD no Liver (HepG2) 21837438
chr19 2588063 2588801 ZNF274 GTRD no Liver (HepG2) 108362870
chr19 2588071 2589053 ZBTB33 GTRD no Lung (A549) 108362871
chr19 2588074 2588616 ZNF143 GTRD no Epithelial (MCF-7) 108362872
chr19 2588091 2588838 ZNF274 GTRD no Cervix (HeLa-S3) 21837440
chr19 2588091 2588838 ZNF274 GTRD no Cervix (HeLa-S3) 108362874
chr19 2588099 2588775 ZNF143 GTRD no Epithelial (MCF-7) 108362875
chr19 2588099 2589019 ZNF274 GTRD no Liver (HepG2) 21837441
chr19 2588099 2589019 ZNF274 GTRD no Liver (HepG2) 108362876
chr19 2588100 2588589 ZNF143 GTRD no Epithelial (MCF-7) 108362877
chr19 2588108 2588849 ZBTB33 GTRD no Lung (A549) 108362878
chr19 2588114 2588743 ZNF143 GTRD no Epithelial (MCF-7) 108362879
chr19 2588115 2588927 ZNF274 GTRD no Liver (HepG2) 21837442
chr19 2588115 2588927 ZNF274 GTRD no Liver (HepG2) 108362880
chr19 2588122 2588689 ZNF143 GTRD no Epithelial (MCF-7) 108362881
chr19 2588130 2588821 ZNF274 GTRD no Liver (HepG2) 21837443
chr19 2588130 2588821 ZNF274 GTRD no Liver (HepG2) 108362882
chr19 2588135 2588992 ZBTB33 GTRD no Lung (A549) 108362884
chr19 2588141 2588882 ZNF143 GTRD no Epithelial (MCF-7) 108362885
chr19 2588146 2588913 ZNF143 GTRD no Epithelial (MCF-7) 108362886
chr19 2588160 2588625 ZNF274 GTRD no Liver (HepG2) 21837445
chr19 2588160 2588625 ZNF274 GTRD no Liver (HepG2) 108362887
chr19 2588165 2588863 ZNF274 GTRD no Cervix (HeLa-S3) 21837446
chr19 2588165 2588863 ZNF274 GTRD no Cervix (HeLa-S3) 108362888
chr19 2588176 2588665 ZNF143 GTRD no Epithelial (MCF-7) 108362889
chr19 2588178 2588601 ZNF143 GTRD no Epithelial (MCF-7) 108362890
chr19 2588178 2588897 ZNF143 GTRD no Epithelial (MCF-7) 108362891
chr19 2588180 2588720 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108362892
chr19 2588188 2588853 ZNF143 GTRD no Epithelial (MCF-7) 108362893
chr19 2588194 2588672 ZNF143 GTRD no Epithelial (MCF-7) 108362894
chr19 2588195 2588859 ZNF143 GTRD no Epithelial (MCF-7) 108362895
chr19 2588202 2588623 ZNF274 GTRD no Liver (HepG2) 21837447
chr19 2588202 2588623 ZNF274 GTRD no Liver (HepG2) 108362896
chr19 2588206 2588851 MYOD GTRD no Muscle (Myoblast) 21837448
chr19 2588206 2588851 MYOD GTRD no Muscle (Myoblast) 108362897
chr19 2588213 2588901 ZNF274 GTRD no Cervix (HeLa-S3) 21837449
chr19 2588213 2588901 ZNF274 GTRD no Cervix (HeLa-S3) 108362898
chr19 2588225 2588946 ZBTB33 GTRD no Lung (A549) 108362899
chr19 2588234 2588936 ZBTB33 GTRD no Lung (A549) 108362900
chr19 2588247 2588647 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21837450
chr19 2588247 2588647 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108362901
chr19 2588261 2588597 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21837451
chr19 2588261 2588597 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108362902
chr19 2588261 2588717 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21837452
chr19 2588261 2588717 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108362903
chr19 2588263 2588678 ZNF143 GTRD no Epithelial (MCF-7) 108362904
chr19 2588282 2588929 ZNF274 GTRD no Liver (HepG2) 21837453
chr19 2588282 2588929 ZNF274 GTRD no Liver (HepG2) 108362905
Genes associated with rs12609340[chr19:2588554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More