EnhancerDB
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  3. rs12629058[chr3:58338809]
Enhancers that have rs12629058[chr3:58338809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58318801 58350235 enh7249
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs12629058[chr3:58338809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58338804 58338813 SP1 TRANSFAC yes 2688658
chr3 58338805 58338813 SP1 TRANSFAC yes 2688659
chr3 58338805 58338815 SP1 JASPAR yes 2688660
Genes associated with rs12629058[chr3:58338809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More