EnhancerDB
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  3. rs12630272[chr3:56954952]
Enhancers that have rs12630272[chr3:56954952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs12630272[chr3:56954952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56954948 56954953 SP1 TRANSFAC yes 2611379
chr3 56954948 56954957 HIC2 JASPAR yes 2611380
chr3 56954951 56954955 LFA1 TRANSFAC yes 2611381
chr3 56954952 56954962 ID4 JASPAR yes 2611382
chr3 56954952 56954962 TCF3 JASPAR yes 2611383
chr3 56954952 56954962 TCF4 JASPAR yes 2611384
Genes associated with rs12630272[chr3:56954952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More