EnhancerDB
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  3. rs12640825[chr4:7977494]
Enhancers that have rs12640825[chr4:7977494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 7955942 7984080 enh21353
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12640825[chr4:7977494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 7977486 7977505 RFX2 JASPAR yes 88150087
chr4 7977490 7977506 RFX2 JASPAR yes 88150088
chr4 7977490 7977506 RFX3 JASPAR yes 88150089
chr4 7977490 7977506 RFX4 JASPAR yes 88150090
chr4 7977490 7977506 RFX5 JASPAR yes 88150091
chr4 7977491 7977510 RFX2 JASPAR yes 88150092
Genes associated with rs12640825[chr4:7977494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More