EnhancerDB
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  3. rs12660376[chr6:16771451]
Enhancers that have rs12660376[chr6:16771451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16764485 16776915 enh38835
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
Transcript factors that have rs12660376[chr6:16771451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16771149 16771474 ZNF263 UCSC Txn Factor no Conserved 108538919
chr6 16771185 16771588 CTCF UCSC Txn Factor no Conserved 108538920
chr6 16771238 16771502 RAD21 UCSC Txn Factor no Conserved 108538921
chr6 16771245 16771523 SMC3 UCSC Txn Factor no Conserved 108538922
chr6 16771431 16771451 RREB1 JASPAR yes 100338123
chr6 16771432 16771452 RREB1 JASPAR yes 100338124
chr6 16771435 16771455 RREB1 JASPAR yes 100338127
chr6 16771438 16771452 PLAG1 JASPAR yes 100338129
Genes associated with rs12660376[chr6:16771451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More