EnhancerDB
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  3. rs12662149[chr6:30735675]
Enhancers that have rs12662149[chr6:30735675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 30735359 30735715 vista51538
VISTA
Transcript factors that have rs12662149[chr6:30735675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30735610 30735890 PAX5 UCSC Txn Factor no Conserved 108539525
chr6 30735671 30735692 IRF1 JASPAR yes 70344250
chr6 30735671 30735692 IRF1 JASPAR yes 101046570
chr6 30735675 30735690 IRF9 JASPAR yes 70344251
chr6 30735675 30735690 IRF9 JASPAR yes 101046571
Genes associated with rs12662149[chr6:30735675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More