EnhancerDB
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  3. rs12665780[chr6:25365744]
Enhancers that have rs12665780[chr6:25365744]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25357285 25373535 enh38931
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12665780[chr6:25365744]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25365730 25365748 NR3C1 JASPAR yes 100851896
chr6 25365735 25365751 SOX4 JASPAR yes 100851897
chr6 25365735 25365751 SOX8 JASPAR yes 100851898
Genes associated with rs12665780[chr6:25365744], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More