EnhancerDB
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  3. rs12723168[chr1:16508629]
Enhancers that have rs12723168[chr1:16508629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 16508402 16508642 vista526
VISTA
Transcript factors that have rs12723168[chr1:16508629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16508626 16508635 THAP1 JASPAR yes 27032330
chr1 16508626 16508635 THAP1 JASPAR yes 118238913
chr1 16508626 16508641 NR2C2 JASPAR yes 27032331
chr1 16508626 16508641 NR2C2 JASPAR yes 118238914
chr1 16508629 16508633 LFA1 TRANSFAC yes 27032332
chr1 16508629 16508633 LFA1 TRANSFAC yes 118238915
Genes associated with rs12723168[chr1:16508629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More