EnhancerDB
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  3. rs12727471[chr1:91472782]
Enhancers that have rs12727471[chr1:91472782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 91471465 91485939 enh486
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr1 91472225 91472812 vista2420
VISTA
Transcript factors that have rs12727471[chr1:91472782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 91472738 91473002 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813926
chr1 91472766 91472787 IRF1 JASPAR yes 30680780
chr1 91472766 91472787 IRF1 JASPAR yes 118326978
chr1 91472771 91472792 IRF1 JASPAR yes 30680781
chr1 91472771 91472792 IRF1 JASPAR yes 118326979
chr1 91472776 91472797 IRF1 JASPAR yes 30680783
chr1 91472776 91472797 IRF1 JASPAR yes 118326981
chr1 91472777 91472783 TCF4 TRANSFAC yes 30680784
chr1 91472777 91472783 TCF4 TRANSFAC yes 118326982
chr1 91472777 91472792 FOXP1 JASPAR yes 30680785
chr1 91472777 91472792 FOXP1 JASPAR yes 118326983
chr1 91472777 91472798 IRF1 JASPAR yes 30680786
chr1 91472777 91472798 IRF1 JASPAR yes 118326984
chr1 91472778 91472789 FOXP2 JASPAR yes 30680787
chr1 91472778 91472789 FOXP2 JASPAR yes 118326985
chr1 91472778 91472790 FOXC2 JASPAR yes 30680788
chr1 91472778 91472790 FOXC2 JASPAR yes 118326986
chr1 91472778 91472793 STAT2 JASPAR yes 30680789
chr1 91472778 91472793 STAT2 JASPAR yes 118326987
chr1 91472778 91472799 IRF1 JASPAR yes 30680790
chr1 91472778 91472799 IRF1 JASPAR yes 118326988
chr1 91472779 91472794 FOXP1 JASPAR yes 30680791
chr1 91472779 91472794 FOXP1 JASPAR yes 118326989
chr1 91472779 91472800 IRF1 JASPAR yes 30680792
chr1 91472779 91472800 IRF1 JASPAR yes 118326990
chr1 91472780 91472801 IRF1 JASPAR yes 30680793
chr1 91472780 91472801 IRF1 JASPAR yes 118326991
chr1 91472781 91472796 FOXP1 JASPAR yes 30680794
chr1 91472781 91472796 FOXP1 JASPAR yes 118326992
chr1 91472781 91472802 IRF1 JASPAR yes 30680795
chr1 91472781 91472802 IRF1 JASPAR yes 118326993
chr1 91472782 91472797 FOXP1 JASPAR yes 30680796
chr1 91472782 91472797 FOXP1 JASPAR yes 118326994
chr1 91472782 91472803 IRF1 JASPAR yes 30680797
chr1 91472782 91472803 IRF1 JASPAR yes 118326995
Genes associated with rs12727471[chr1:91472782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More