EnhancerDB
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  3. rs12728550[chr1:232755779]
Enhancers that have rs12728550[chr1:232755779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
chr1 232753930 232757436 vista147
VISTA
Transcript factors that have rs12728550[chr1:232755779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232755771 232755783 HES5 JASPAR yes 36178130
chr1 232755771 232755783 HES7 JASPAR yes 36178131
chr1 232755771 232755783 HES5 JASPAR yes 71162711
chr1 232755771 232755783 HES7 JASPAR yes 71162712
Genes associated with rs12728550[chr1:232755779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More