EnhancerDB
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  3. rs12728592[chr1:10854073]
Enhancers that have rs12728592[chr1:10854073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10819865 10855515 enh58077
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Heart
chr1 10853986 10854555 vista345
VISTA
Transcript factors that have rs12728592[chr1:10854073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10852961 10854196 ZNF274 GTRD no Bone Marrow (K562) 107802059
chr1 10852961 10854196 ZNF274 GTRD no Bone Marrow (K562) 107802060
chr1 10854067 10854086 CTCF JASPAR yes 26748864
chr1 10854067 10854086 CTCF JASPAR yes 118229544
chr1 10854070 10854085 TFAP2A JASPAR yes 26748865
chr1 10854070 10854085 TFAP2A JASPAR yes 118229545
chr1 10854072 10854085 TFAP2A JASPAR yes 26748866
chr1 10854072 10854085 TFAP2B JASPAR yes 26748867
chr1 10854072 10854085 TFAP2C JASPAR yes 26748868
chr1 10854072 10854085 TFAP2A JASPAR yes 118229546
chr1 10854072 10854085 TFAP2B JASPAR yes 118229547
chr1 10854072 10854085 TFAP2C JASPAR yes 118229548
chr1 10854073 10854079 SP1 TRANSFAC yes 26748869
chr1 10854073 10854079 SP1 TRANSFAC yes 118229549
chr1 10854073 10854085 TFAP2A JASPAR yes 26748870
chr1 10854073 10854085 TFAP2B JASPAR yes 26748871
chr1 10854073 10854085 TFAP2C JASPAR yes 26748872
chr1 10854073 10854085 TFAP2A JASPAR yes 118229550
chr1 10854073 10854085 TFAP2B JASPAR yes 118229551
chr1 10854073 10854085 TFAP2C JASPAR yes 118229552
Genes associated with rs12728592[chr1:10854073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More