EnhancerDB
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  3. rs12730256[chr1:22349158]
Enhancers that have rs12730256[chr1:22349158]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs12730256[chr1:22349158]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22349138 22349158 RREB1 JASPAR yes 27338793
chr1 22349138 22349159 IRF1 JASPAR yes 27338794
chr1 22349145 22349160 FOXP1 JASPAR yes 27338799
chr1 22349146 22349166 RREB1 JASPAR yes 27338801
chr1 22349146 22349167 IRF1 JASPAR yes 27338802
chr1 22349147 22349168 IRF1 JASPAR yes 27338803
chr1 22349152 22349173 IRF1 JASPAR yes 27338804
chr1 22349153 22349159 TCF4 TRANSFAC yes 27338805
chr1 22349153 22349168 FOXP1 JASPAR yes 27338806
chr1 22349153 22349174 IRF1 JASPAR yes 27338807
chr1 22349154 22349165 FOXP2 JASPAR yes 27338808
chr1 22349154 22349166 FOXC2 JASPAR yes 27338809
chr1 22349154 22349169 STAT2 JASPAR yes 27338810
chr1 22349154 22349175 IRF1 JASPAR yes 27338811
chr1 22349155 22349170 FOXP1 JASPAR yes 27338812
chr1 22349157 22349172 FOXP1 JASPAR yes 27338813
chr1 22349158 22349173 FOXP1 JASPAR yes 27338814
Genes associated with rs12730256[chr1:22349158], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More