EnhancerDB
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  3. rs12733548[chr1:239984645]
Enhancers that have rs12733548[chr1:239984645]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 239967733 239985595 enh12821
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12733548[chr1:239984645]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 239984635 239984645 BHLHE22 JASPAR yes 36540203
chr1 239984635 239984645 NEUROD2 JASPAR yes 36540204
chr1 239984635 239984645 OLIG1 JASPAR yes 36540205
chr1 239984635 239984645 OLIG2 JASPAR yes 36540206
chr1 239984635 239984645 OLIG3 JASPAR yes 36540207
chr1 239984642 239984659 ESR1 JASPAR yes 36540208
Genes associated with rs12733548[chr1:239984645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 240177648 240638489 + FMN2 ENSG00000155816.15 240177648 193003 Breast 0.445741 1986