EnhancerDB
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Enhancers that have rs12740361[chr1:201513222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs12740361[chr1:201513222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201511471 201513599 ZNF274 GTRD no Cervix (HeLa-S3) 21364576
chr1 201511504 201514124 ZNF274 GTRD no Cervix (HeLa-S3) 21364577
chr1 201511771 201513865 CTCF GTRD no Spleen 21364579
chr1 201512357 201513907 ZNF274 GTRD no Cervix (HeLa-S3) 21364583
chr1 201512692 201513394 ZNF274 GTRD no Cervix (HeLa-S3) 21364584
chr1 201512714 201513352 ZNF274 GTRD no Cervix (HeLa-S3) 21364585
chr1 201512762 201513479 ZNF274 GTRD no Cervix (HeLa-S3) 21364586
chr1 201512826 201513399 ZNF274 GTRD no Cervix (HeLa-S3) 21364587
chr1 201512827 201513317 ZNF274 GTRD no Cervix (HeLa-S3) 21364588
chr1 201512829 201513419 ZNF274 GTRD no Cervix (HeLa-S3) 21364589
chr1 201512836 201513370 ZNF274 GTRD no Cervix (HeLa-S3) 21364590
chr1 201512846 201513272 ZNF274 GTRD no Cervix (HeLa-S3) 21364591
chr1 201512862 201513435 ZNF274 GTRD no Cervix (HeLa-S3) 21364592
chr1 201512904 201513231 ZNF274 GTRD no Cervix (HeLa-S3) 21364593
chr1 201512972 201513341 TCF7L2 GTRD no Colon (HCT116) 21364594
chr1 201513218 201513228 NFKB1 JASPAR yes 34504836
chr1 201513222 201513234 YY1 JASPAR yes 34504837
Genes associated with rs12740361[chr1:201513222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More