EnhancerDB
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  3. rs12742244[chr1:21573600]
Enhancers that have rs12742244[chr1:21573600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21572485 21581129 enh11590
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs12742244[chr1:21573600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21573589 21573600 HOXC11 JASPAR yes 27286646
chr1 21573589 21573600 HOXC12 JASPAR yes 27286647
chr1 21573589 21573600 HOXC13 JASPAR yes 27286648
chr1 21573590 21573600 HOXC10 JASPAR yes 27286649
chr1 21573590 21573600 HOXD11 JASPAR yes 27286650
chr1 21573599 21573606 SP1 TRANSFAC yes 27286651
Genes associated with rs12742244[chr1:21573600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More