EnhancerDB
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  3. rs12749719[chr1:7609052]
Enhancers that have rs12749719[chr1:7609052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7605943 7624475 enh41
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs12749719[chr1:7609052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7608609 7609401 SOX2 GTRD no Neural Stem Cells (H9) 107801932
chr1 7609039 7609052 TFAP2A JASPAR yes 26475464
chr1 7609039 7609052 TFAP2B JASPAR yes 26475465
chr1 7609039 7609052 TFAP2C JASPAR yes 26475466
chr1 7609044 7609054 MZF1 JASPAR yes 26475467
Genes associated with rs12749719[chr1:7609052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More