EnhancerDB
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  3. rs12749973[chr1:52019845]
Enhancers that have rs12749973[chr1:52019845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12749973[chr1:52019845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52019834 52019849 MEF2C JASPAR yes 28849791
chr1 52019835 52019850 MEF2A JASPAR yes 28849792
chr1 52019836 52019848 MEF2A JASPAR yes 28849796
chr1 52019840 52019851 FOXB1 JASPAR yes 28849797
chr1 52019840 52019851 FOXC1 JASPAR yes 28849798
chr1 52019840 52019852 FOXC2 JASPAR yes 28849799
chr1 52019840 52019852 MEF2B JASPAR yes 28849800
chr1 52019840 52019852 MEF2D JASPAR yes 28849801
chr1 52019841 52019853 FOXI1 JASPAR yes 28849802
chr1 52019842 52019846 TEAD2 TRANSFAC yes 28849803
chr1 52019842 52019847 TBP TRANSFAC yes 28849804
chr1 52019842 52019848 TMF TRANSFAC yes 28849805
Genes associated with rs12749973[chr1:52019845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More