EnhancerDB
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  3. rs1275408[chr14:69594182]
Enhancers that have rs1275408[chr14:69594182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 69593952 69611235 enh3304
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1275408[chr14:69594182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 69594175 69594183 NR4A2 JASPAR yes 116289000
chr14 69594180 69594188 HOXA5 JASPAR yes 116289001
chr14 69594181 69594191 GBX1 JASPAR yes 116289002
chr14 69594181 69594191 GBX2 JASPAR yes 116289003
chr14 69594182 69594190 BARX1 JASPAR yes 116289004
chr14 69594182 69594190 EN1 JASPAR yes 116289005
chr14 69594182 69594190 ISL2 JASPAR yes 116289006
chr14 69594182 69594190 MSX1 JASPAR yes 116289007
chr14 69594182 69594190 MSX2 JASPAR yes 116289008
chr14 69594182 69594190 PDX1 JASPAR yes 116289009
Genes associated with rs1275408[chr14:69594182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More