EnhancerDB
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  3. rs12755598[chr1:16491406]
Enhancers that have rs12755598[chr1:16491406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12755598[chr1:16491406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16491401 16491411 NEUROD2 JASPAR yes 27029832
chr1 16491401 16491412 USF1 JASPAR yes 27029833
chr1 16491401 16491412 USF2 JASPAR yes 27029834
chr1 16491402 16491412 MAX JASPAR yes 27029835
chr1 16491406 16491421 HNF4A JASPAR yes 27029836
Genes associated with rs12755598[chr1:16491406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More