EnhancerDB
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  3. rs12759661[chr1:203625049]
Enhancers that have rs12759661[chr1:203625049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203594185 203628195 enh12562
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 203624863 203625211 vista4653
VISTA
Transcript factors that have rs12759661[chr1:203625049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203624274 203625144 ZNF274 GTRD no Bone Marrow (K562) 21369740
chr1 203624274 203625144 ZNF274 GTRD no Bone Marrow (K562) 107859232
chr1 203624344 203625119 ZNF274 GTRD no Bone Marrow (K562) 21369741
chr1 203624344 203625119 ZNF274 GTRD no Bone Marrow (K562) 107859235
chr1 203624351 203625085 ZNF274 GTRD no Bone Marrow (K562) 21369742
chr1 203624351 203625085 ZNF274 GTRD no Bone Marrow (K562) 107859236
chr1 203624386 203625137 ZNF274 GTRD no Bone Marrow (K562) 21369743
chr1 203624386 203625137 ZNF274 GTRD no Bone Marrow (K562) 107859237
chr1 203624399 203625182 ZNF274 GTRD no Bone Marrow (K562) 21369744
chr1 203624399 203625182 ZNF274 GTRD no Bone Marrow (K562) 107859238
chr1 203624682 203625091 TCF7L2 GTRD no Colon (HCT116) 21369746
chr1 203624682 203625091 TCF7L2 GTRD no Colon (HCT116) 107859240
chr1 203624765 203625134 ZNF274 GTRD no Bone Marrow (K562) 21369747
chr1 203624765 203625134 ZNF274 GTRD no Bone Marrow (K562) 107859241
chr1 203624864 203625138 ZNF274 GTRD no Liver (HepG2) 107859242
chr1 203625029 203625050 IRF1 JASPAR yes 34651779
chr1 203625029 203625050 IRF1 JASPAR yes 118436758
chr1 203625035 203625050 FOXP1 JASPAR yes 34651784
chr1 203625035 203625050 FOXP1 JASPAR yes 118436763
Genes associated with rs12759661[chr1:203625049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More