EnhancerDB
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  3. rs12829878[chr12:65030133]
Enhancers that have rs12829878[chr12:65030133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12829878[chr12:65030133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65030118 65030133 TFAP2C JASPAR yes 121419074
chr12 65030130 65030134 NFE TRANSFAC yes 121419075
chr12 65030130 65030135 GATA1 TRANSFAC yes 121419076
chr12 65030130 65030136 GATA3 JASPAR yes 121419077
Genes associated with rs12829878[chr12:65030133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More