EnhancerDB
  1. Home
  2. SNP
  3. rs12829983[chr12:125385655]
Enhancers that have rs12829983[chr12:125385655]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12829983[chr12:125385655]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125385241 125385813 ZNF274 GTRD no Liver (HepG2) 21583289
chr12 125385562 125385852 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21583293
chr12 125385581 125385901 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583294
chr12 125385595 125385935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583295
chr12 125385598 125385814 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21583296
chr12 125385638 125385874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21583297
chr12 125385643 125385656 POU2F2 JASPAR yes 124431314
chr12 125385646 125385656 BHLHE22 JASPAR yes 124431315
chr12 125385646 125385656 NEUROD2 JASPAR yes 124431316
chr12 125385651 125385666 HNF4A JASPAR yes 124431317
chr12 125385652 125385666 RXRB JASPAR yes 124431318
chr12 125385652 125385666 RXRG JASPAR yes 124431319
chr12 125385652 125385667 HNF4G JASPAR yes 124431320
chr12 125385652 125385667 NR2C2 JASPAR yes 124431321
Genes associated with rs12829983[chr12:125385655], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More