EnhancerDB
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  3. rs12898178[chr14:50489927]
Enhancers that have rs12898178[chr14:50489927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50483022 50494875 enh30858
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs12898178[chr14:50489927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50489921 50489942 IRF1 JASPAR yes 115222043
chr14 50489922 50489937 FOXP1 JASPAR yes 115222044
chr14 50489922 50489943 IRF1 JASPAR yes 115222045
chr14 50489923 50489934 FOXP2 JASPAR yes 115222046
chr14 50489923 50489938 STAT2 JASPAR yes 115222047
chr14 50489923 50489944 IRF1 JASPAR yes 115222048
chr14 50489924 50489939 FOXP1 JASPAR yes 115222049
chr14 50489924 50489945 IRF1 JASPAR yes 115222050
chr14 50489924 50490028 ZNF274 GTRD no Cervix (HeLa-S3) 21616123
chr14 50489925 50489946 IRF1 JASPAR yes 115222051
chr14 50489926 50489941 FOXP1 JASPAR yes 115222052
chr14 50489926 50489947 IRF1 JASPAR yes 115222053
chr14 50489927 50489942 FOXP1 JASPAR yes 115222054
chr14 50489927 50489948 IRF1 JASPAR yes 115222055
Genes associated with rs12898178[chr14:50489927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More