EnhancerDB
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  3. rs1292090[chr1:27885944]
Enhancers that have rs1292090[chr1:27885944]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs1292090[chr1:27885944]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27881821 27888089 ZNF274 GTRD no Blood (GM12878) 107802589
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27885927 27885947 TP63 JASPAR yes 27708949
chr1 27885928 27885946 TP53 JASPAR yes 27708950
chr1 27885928 27885946 TP73 JASPAR yes 27708951
chr1 27885929 27885944 TP53 JASPAR yes 27708953
chr1 27885930 27885945 TP53 JASPAR yes 27708954
chr1 27885932 27885945 POU2F2 JASPAR yes 27708955
Genes associated with rs1292090[chr1:27885944], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More