EnhancerDB
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  3. rs12921572[chr16:89419615]
Enhancers that have rs12921572[chr16:89419615]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12921572[chr16:89419615]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89419596 89419615 PAX5 JASPAR yes 12335113
chr16 89419604 89419620 ZNF143 JASPAR yes 12335114
chr16 89419611 89419624 SMAD2 JASPAR yes 12335115
Genes associated with rs12921572[chr16:89419615], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More