EnhancerDB
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  3. rs12923580[chr16:11591787]
Enhancers that have rs12923580[chr16:11591787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11585463 11594633 enh16536
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12923580[chr16:11591787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11591142 11591802 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21690812
chr16 11591142 11591802 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181781
chr16 11591172 11591822 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21690814
chr16 11591172 11591822 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181784
chr16 11591211 11591787 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108181788
chr16 11591771 11592295 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21690830
chr16 11591771 11592295 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108181809
chr16 11591786 11591799 POU2F2 JASPAR yes 9514569
Genes associated with rs12923580[chr16:11591787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More