EnhancerDB
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  3. rs12929164[chr16:85336804]
Enhancers that have rs12929164[chr16:85336804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12929164[chr16:85336804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85333623 85337301 ZNF143 GTRD no Epithelial (MCF-7) 21722767
chr16 85333636 85337376 ZNF143 GTRD no Epithelial (MCF-7) 21722768
chr16 85334244 85337297 TCF7L2 GTRD no Colon (HCT116) 21722810
chr16 85334831 85337323 ZNF143 GTRD no Epithelial (MCF-7) 21722867
chr16 85334868 85337190 ZNF143 GTRD no Epithelial (MCF-7) 21722874
chr16 85336006 85337070 ZNF274 GTRD no Bone Marrow (K562) 21722945
chr16 85336268 85337306 ZNF143 GTRD no Epithelial (MCF-7) 21722951
chr16 85336383 85337151 ZNF274 GTRD no Bone Marrow (K562) 21722953
chr16 85336515 85336971 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21722956
chr16 85336761 85337263 ZNF274 GTRD no Bone Marrow (K562) 21722957
chr16 85336789 85336808 RFX2 JASPAR yes 12044420
chr16 85336803 85336808 ETS2 TRANSFAC yes 12044421
Genes associated with rs12929164[chr16:85336804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More