EnhancerDB
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  3. rs12929706[chr16:69513835]
Enhancers that have rs12929706[chr16:69513835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69497735 69521555 enh16751
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12929706[chr16:69513835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69512893 69514391 P63 GTRD no Skin (Keratinocyte) 21711879
chr16 69513014 69514290 P63 GTRD no Skin (Keratinocyte) 21711880
chr16 69513123 69514184 P63 GTRD no Skin (Keratinocyte) 21711881
chr16 69513256 69514982 ZNF274 GTRD no Cervix (HeLa-S3) 21711882
chr16 69513279 69513872 ZNF143 GTRD no Epithelial (MCF-7) 21711883
chr16 69513287 69513890 ZNF143 GTRD no Epithelial (MCF-7) 21711884
chr16 69513289 69514211 P63 GTRD no Skin (Keratinocyte) 21711885
chr16 69513378 69514152 ZNF274 GTRD no Cervix (HeLa-S3) 21711887
chr16 69513426 69513982 ZNF274 GTRD no Cervix (HeLa-S3) 21711888
chr16 69513563 69514225 ZNF274 GTRD no Cervix (HeLa-S3) 21711890
chr16 69513586 69513936 TEF1 GTRD no Bone (Osteoblast) 21711891
chr16 69513612 69514860 ZNF274 GTRD no Cervix (HeLa-S3) 21711892
chr16 69513644 69514174 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21711893
chr16 69513669 69514140 ZNF274 GTRD no Liver (HepG2) 21711894
chr16 69513714 69514190 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21711895
chr16 69513728 69514018 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21711896
chr16 69513731 69514065 ZNF143 GTRD no Epithelial (MCF-7) 21711897
chr16 69513737 69514136 ZNF274 GTRD no Liver (HepG2) 21711898
chr16 69513738 69514081 ZNF274 GTRD no Liver (HepG2) 21711899
chr16 69513739 69514079 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21711900
chr16 69513761 69515844 ZNF274 GTRD no Cervix (HeLa-S3) 21711901
chr16 69513772 69514092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21711902
chr16 69513775 69514105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21711903
chr16 69513776 69514012 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21711904
chr16 69513781 69514037 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21711905
chr16 69513819 69513835 SOX4 JASPAR yes 11271890
Genes associated with rs12929706[chr16:69513835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More