EnhancerDB
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  3. rs12930255[chr16:16050233]
Enhancers that have rs12930255[chr16:16050233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 16045445 16094717 enh3913
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12930255[chr16:16050233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 16050218 16050233 FOXP1 JASPAR yes 9755160
chr16 16050218 16050239 IRF1 JASPAR yes 9755161
chr16 16050219 16050234 FOXP1 JASPAR yes 9755163
chr16 16050221 16050236 FOXP1 JASPAR yes 9755164
chr16 16050222 16050237 STAT2 JASPAR yes 9755165
chr16 16050223 16050238 FOXP1 JASPAR yes 9755166
chr16 16050226 16050237 FOXP2 JASPAR yes 9755167
chr16 16050230 16050236 HiNF-A TRANSFAC yes 9755168
Genes associated with rs12930255[chr16:16050233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More