EnhancerDB
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  3. rs12935365[chr16:89450485]
Enhancers that have rs12935365[chr16:89450485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12935365[chr16:89450485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89450474 89450493 PAX5 JASPAR yes 12339348
chr16 89450483 89450493 SP1 JASPAR yes 12339349
Genes associated with rs12935365[chr16:89450485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 406873 Esophagus 0.319023 15169