EnhancerDB
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  3. rs12935457[chr16:85599399]
Enhancers that have rs12935457[chr16:85599399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12935457[chr16:85599399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 21729339
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216159
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216160
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216161
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216162
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216163
chr16 85599151 85599908 ZNF274 GTRD no Bone Marrow (K562) 21729341
chr16 85599172 85600564 TCF7L2 GTRD no Colon (HCT116) 21729342
chr16 85599188 85599837 ZNF274 GTRD no Bone Marrow (K562) 21729343
chr16 85599197 85604787 ZNF274 GTRD no Bone Marrow (K562) 21729344
chr16 85599197 85604787 ZNF274 GTRD no Bone Marrow (K562) 108216164
chr16 85599197 85604787 ZNF274 GTRD no Bone Marrow (K562) 108216165
chr16 85599197 85604787 ZNF274 GTRD no Bone Marrow (K562) 108216166
chr16 85599197 85604787 ZNF274 GTRD no Bone Marrow (K562) 108216167
chr16 85599197 85604787 ZNF274 GTRD no Bone Marrow (K562) 108216168
chr16 85599213 85599906 ZNF274 GTRD no Bone Marrow (K562) 21729345
chr16 85599225 85600530 ZNF143 GTRD no Epithelial (MCF-7) 21729346
chr16 85599236 85600399 TCF7L2 GTRD no Colon (HCT116) 21729347
chr16 85599247 85599703 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729348
chr16 85599247 85599784 TCF7L2 GTRD no Colon (HCT116) 21729349
chr16 85599252 85599626 TCF7L2 GTRD no Colon (HCT116) 21729350
chr16 85599258 85600983 ZNF143 GTRD no Epithelial (MCF-7) 21729351
chr16 85599258 85600983 ZNF143 GTRD no Epithelial (MCF-7) 108216169
chr16 85599270 85600698 ZNF274 GTRD no Blood (GM12878) 108216170
chr16 85599310 85599886 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729352
chr16 85599315 85599839 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729353
chr16 85599324 85599710 ZNF274 GTRD no Bone Marrow (K562) 21729354
chr16 85599336 85599710 ZNF274 GTRD no Bone Marrow (K562) 21729355
chr16 85599390 85599411 ZNF263 JASPAR yes 12077335
chr16 85599394 85599404 TBX21 JASPAR yes 12077336
chr16 85599394 85599405 TBX20 JASPAR yes 12077337
chr16 85599394 85599405 TBX2 JASPAR yes 12077338
chr16 85599394 85599407 EOMES JASPAR yes 12077339
chr16 85599395 85599403 MGA JASPAR yes 12077340
chr16 85599395 85599403 TBX15 JASPAR yes 12077341
chr16 85599395 85599403 TBX1 JASPAR yes 12077342
chr16 85599395 85599403 TBX4 JASPAR yes 12077343
chr16 85599395 85599403 TBX5 JASPAR yes 12077344
chr16 85599395 85599405 TBR1 JASPAR yes 12077345
Genes associated with rs12935457[chr16:85599399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More