EnhancerDB
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  3. rs12937231[chr17:62991897]
Enhancers that have rs12937231[chr17:62991897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 62991606 62991997 vista25546
VISTA
Transcript factors that have rs12937231[chr17:62991897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62991882 62991897 RFX5 JASPAR yes 21275307
chr17 62991882 62991897 RFX5 JASPAR yes 55336999
chr17 62991893 62991898 ETS2 TRANSFAC yes 21275308
chr17 62991893 62991898 ETS2 TRANSFAC yes 55337000
chr17 62991897 62991911 SPI1 JASPAR yes 21275309
chr17 62991897 62991911 SPIC JASPAR yes 21275310
chr17 62991897 62991911 SPI1 JASPAR yes 55337001
chr17 62991897 62991911 SPIC JASPAR yes 55337002
Genes associated with rs12937231[chr17:62991897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 63006833 63052957 - GNA13 ENSG00000120063.5 63052957 14936 Stomach 0.017792 16165