EnhancerDB
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  3. rs12938048[chr17:49029224]
Enhancers that have rs12938048[chr17:49029224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12938048[chr17:49029224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49029170 49029483 ZNF274 GTRD no Bone Marrow (K562) 21771710
chr17 49029220 49029230 CLOCK JASPAR yes 54738361
chr17 49029220 49029230 HEY1 JASPAR yes 54738362
chr17 49029220 49029230 HEY2 JASPAR yes 54738363
chr17 49029220 49029230 MAX JASPAR yes 54738364
chr17 49029220 49029230 MNT JASPAR yes 54738365
chr17 49029220 49029231 USF1 JASPAR yes 54738366
chr17 49029221 49029228 USF1 JASPAR yes 54738367
chr17 49029221 49029231 MAX JASPAR yes 54738368
chr17 49029222 49029227 MYC TRANSFAC yes 54738369
chr17 49029222 49029227 USF1 TRANSFAC yes 54738370
chr17 49029222 49029227 USF2 TRANSFAC yes 54738371
Genes associated with rs12938048[chr17:49029224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More