EnhancerDB
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  3. rs12938667[chr17:1898800]
Enhancers that have rs12938667[chr17:1898800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12938667[chr17:1898800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1898795 1898810 HNF4A JASPAR yes 52714289
chr17 1898796 1898810 RXRG JASPAR yes 52714290
chr17 1898796 1898811 HNF4G JASPAR yes 52714291
chr17 1898796 1898811 NR2C2 JASPAR yes 52714292
chr17 1898800 1898806 SOX10 JASPAR yes 52714293
Genes associated with rs12938667[chr17:1898800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More