EnhancerDB
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  3. rs12938856[chr17:40570649]
Enhancers that have rs12938856[chr17:40570649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12938856[chr17:40570649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40570645 40570651 GATA3 JASPAR yes 54303842
chr17 40570649 40570667 NR3C1 JASPAR yes 54303843
Genes associated with rs12938856[chr17:40570649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More