EnhancerDB
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  3. rs12939102[chr17:55500642]
Enhancers that have rs12939102[chr17:55500642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12939102[chr17:55500642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55500627 55500642 AR JASPAR yes 54953916
chr17 55500627 55500644 NR3C1 JASPAR yes 54953917
chr17 55500627 55500644 NR3C2 JASPAR yes 54953918
Genes associated with rs12939102[chr17:55500642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More