EnhancerDB
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  3. rs12939143[chr17:78724610]
Enhancers that have rs12939143[chr17:78724610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12939143[chr17:78724610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 21797104
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307176
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307177
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 21797105
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307178
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307179
chr17 78722155 78724945 ZNF274 GTRD no Blood (GM12878) 21797106
chr17 78722155 78724945 ZNF274 GTRD no Blood (GM12878) 108307180
chr17 78722992 78724924 ZBTB33 GTRD no Brain (SK-N-SH) 21797107
chr17 78722992 78724924 ZBTB33 GTRD no Brain (SK-N-SH) 108307181
chr17 78723605 78726272 ZNF274 GTRD no Blood (GM12878) 21797108
chr17 78723605 78726272 ZNF274 GTRD no Blood (GM12878) 108307182
chr17 78723605 78726272 ZNF274 GTRD no Blood (GM12878) 108307183
chr17 78723684 78726307 ZNF274 GTRD no Blood (GM12878) 21797109
chr17 78723684 78726307 ZNF274 GTRD no Blood (GM12878) 108307184
chr17 78723684 78726307 ZNF274 GTRD no Blood (GM12878) 108307185
chr17 78723855 78725090 ZNF274 GTRD no Blood (GM12878) 21797110
chr17 78723855 78725090 ZNF274 GTRD no Blood (GM12878) 108307186
chr17 78724048 78724966 ZNF274 GTRD no Cervix (HeLa-S3) 108307187
chr17 78724053 78724979 ZBTB33 GTRD no Lung (A549) 21797111
chr17 78724053 78724979 ZBTB33 GTRD no Lung (A549) 108307188
chr17 78724199 78724879 ZNF143 GTRD no Epithelial (MCF-7) 21797112
chr17 78724199 78724879 ZNF143 GTRD no Epithelial (MCF-7) 108307189
chr17 78724263 78724940 ZNF143 GTRD no Epithelial (MCF-7) 21797113
chr17 78724263 78724940 ZNF143 GTRD no Epithelial (MCF-7) 108307190
chr17 78724267 78724838 ZNF143 GTRD no Epithelial (MCF-7) 21797114
chr17 78724267 78724838 ZNF143 GTRD no Epithelial (MCF-7) 108307191
chr17 78724341 78725052 ZNF143 GTRD no Epithelial (MCF-7) 21797115
chr17 78724341 78725052 ZNF143 GTRD no Epithelial (MCF-7) 108307192
chr17 78724361 78725162 ZBTB33 GTRD no Lung (A549) 21797116
chr17 78724361 78725162 ZBTB33 GTRD no Lung (A549) 108307193
chr17 78724381 78724964 ZBTB33 GTRD no Lung (A549) 21797117
chr17 78724381 78724964 ZBTB33 GTRD no Lung (A549) 108307194
chr17 78724401 78724927 ZNF143 GTRD no Epithelial (MCF-7) 21797118
chr17 78724401 78724927 ZNF143 GTRD no Epithelial (MCF-7) 108307195
chr17 78724403 78724998 ZBTB33 GTRD no Lung (A549) 21797119
chr17 78724403 78724998 ZBTB33 GTRD no Lung (A549) 108307196
chr17 78724410 78724909 ZNF143 GTRD no Epithelial (MCF-7) 21797120
chr17 78724410 78724909 ZNF143 GTRD no Epithelial (MCF-7) 108307197
chr17 78724429 78724927 ZNF274 GTRD no Liver (HepG2) 21797121
chr17 78724429 78724927 ZNF274 GTRD no Liver (HepG2) 108307198
chr17 78724437 78724999 ZNF143 GTRD no Epithelial (MCF-7) 21797122
chr17 78724437 78724999 ZNF143 GTRD no Epithelial (MCF-7) 108307199
chr17 78724457 78724909 ZNF143 GTRD no Epithelial (MCF-7) 21797123
chr17 78724457 78724909 ZNF143 GTRD no Epithelial (MCF-7) 108307200
chr17 78724473 78725025 ZNF143 GTRD no Epithelial (MCF-7) 21797124
chr17 78724473 78725025 ZNF143 GTRD no Epithelial (MCF-7) 108307201
chr17 78724493 78726205 ZNF274 GTRD no Blood (GM12878) 21797125
chr17 78724493 78726205 ZNF274 GTRD no Blood (GM12878) 108307202
chr17 78724493 78726205 ZNF274 GTRD no Blood (GM12878) 108307203
chr17 78724501 78724843 ZNF274 GTRD no Bone Marrow (K562) 108307204
chr17 78724535 78724969 ZNF143 GTRD no Epithelial (MCF-7) 21797126
chr17 78724535 78724969 ZNF143 GTRD no Epithelial (MCF-7) 108307205
Genes associated with rs12939143[chr17:78724610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More