EnhancerDB
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  3. rs12939588[chr17:60902176]
Enhancers that have rs12939588[chr17:60902176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60893841 60907875 enh17280
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs12939588[chr17:60902176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60901110 60902855 ZBTB33 GTRD no Brain (SK-N-SH) 21778189
chr17 60901185 60903598 ZBTB33 GTRD no Brain (SK-N-SH) 21778190
chr17 60901194 60902351 TEF1 GTRD no Bone (Osteoblast) 21778191
chr17 60901201 60902255 ZBTB33 GTRD no Brain (SK-N-SH) 21778192
chr17 60901212 60902316 ZNF274 GTRD no Cervix (HeLa-S3) 21778193
chr17 60901225 60902805 ZBTB33 GTRD no Brain (SK-N-SH) 21778195
chr17 60901227 60902456 ZBTB33 GTRD no Brain (SK-N-SH) 21778196
chr17 60901238 60902456 ZBTB33 GTRD no Brain (SK-N-SH) 21778197
chr17 60901247 60902356 ZNF274 GTRD no Cervix (HeLa-S3) 21778198
chr17 60901319 60902825 ZBTB33 GTRD no Brain (SK-N-SH) 21778199
chr17 60901335 60902345 ZBTB33 GTRD no Brain (SK-N-SH) 21778200
chr17 60901360 60902333 ZNF274 GTRD no Cervix (HeLa-S3) 21778201
chr17 60901394 60902498 ZNF274 GTRD no Cervix (HeLa-S3) 21778202
chr17 60901396 60902261 ZBTB33 GTRD no Brain (SK-N-SH) 21778203
chr17 60901414 60902452 ZBTB33 GTRD no Brain (SK-N-SH) 21778204
chr17 60901560 60902289 ZBTB33 GTRD no Brain (SK-N-SH) 21778205
chr17 60901614 60902599 ZBTB33 GTRD no Brain (SK-N-SH) 21778206
chr17 60901625 60902372 ZBTB33 GTRD no Brain (SK-N-SH) 21778207
chr17 60901652 60902388 ZBTB33 GTRD no Brain (SK-N-SH) 21778208
chr17 60901690 60902196 ZBTB33 GTRD no Brain (SK-N-SH) 21778209
chr17 60901706 60902531 ZBTB33 GTRD no Brain (SK-N-SH) 21778210
chr17 60901714 60902368 ZBTB33 GTRD no Lung (A549) 21778211
chr17 60901730 60902657 ZBTB33 GTRD no Brain (SK-N-SH) 21778213
chr17 60901731 60903025 ZBTB33 GTRD no Brain (SK-N-SH) 21778214
chr17 60901774 60902195 ZNF274 GTRD no Cervix (HeLa-S3) 21778216
chr17 60901952 60902528 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21778218
chr17 60901985 60902449 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778219
chr17 60901986 60902370 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778220
chr17 60902024 60902594 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21778221
chr17 60902048 60902588 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21778222
chr17 60902064 60902604 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21778223
chr17 60902079 60902555 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778224
chr17 60902083 60902519 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21778225
chr17 60902091 60902547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778226
chr17 60902097 60902327 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21778227
chr17 60902121 60902517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778228
chr17 60902125 60902455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778229
chr17 60902126 60902630 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21778230
chr17 60902131 60902507 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778231
chr17 60902156 60902496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778232
chr17 60902173 60902179 MAZ TRANSFAC yes 55215668
chr17 60902173 60902433 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778233
chr17 60902175 60902504 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21778234
Genes associated with rs12939588[chr17:60902176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More