EnhancerDB
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  3. rs12941507[chr17:62986561]
Enhancers that have rs12941507[chr17:62986561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12941507[chr17:62986561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 21780807
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 108283232
chr17 62985932 62987976 ZNF143 GTRD no Epithelial (MCF-7) 21780808
chr17 62985932 62987976 ZNF143 GTRD no Epithelial (MCF-7) 108283233
chr17 62985937 62987943 ZNF143 GTRD no Epithelial (MCF-7) 21780809
chr17 62985937 62987943 ZNF143 GTRD no Epithelial (MCF-7) 108283234
chr17 62985993 62987924 ZNF143 GTRD no Epithelial (MCF-7) 21780810
chr17 62985993 62987924 ZNF143 GTRD no Epithelial (MCF-7) 108283235
chr17 62985996 62987924 ZNF143 GTRD no Epithelial (MCF-7) 21780811
chr17 62985996 62987924 ZNF143 GTRD no Epithelial (MCF-7) 108283236
chr17 62986008 62987908 ZNF143 GTRD no Epithelial (MCF-7) 21780812
chr17 62986008 62987908 ZNF143 GTRD no Epithelial (MCF-7) 108283237
chr17 62986015 62987933 ZNF143 GTRD no Epithelial (MCF-7) 21780813
chr17 62986015 62987933 ZNF143 GTRD no Epithelial (MCF-7) 108283238
chr17 62986070 62987923 ZNF143 GTRD no Epithelial (MCF-7) 21780814
chr17 62986070 62987923 ZNF143 GTRD no Epithelial (MCF-7) 108283239
chr17 62986134 62986694 TCF7L2 GTRD no Colon (HCT116) 21780815
chr17 62986190 62986904 TCF7L2 GTRD no Colon (HCT116) 21780816
chr17 62986205 62987558 ZNF143 GTRD no Epithelial (MCF-7) 21780817
chr17 62986205 62987558 ZNF143 GTRD no Epithelial (MCF-7) 108283240
chr17 62986398 62987190 MYOD GTRD no Muscle (Myoblast) 108283241
chr17 62986542 62986561 PAX5 JASPAR yes 55336175
Genes associated with rs12941507[chr17:62986561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More