EnhancerDB
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  3. rs12942146[chr17:79550948]
Enhancers that have rs12942146[chr17:79550948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79539405 79553215 enh32380
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs12942146[chr17:79550948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79550942 79550956 POU4F1 JASPAR yes 56335398
chr17 79550942 79550958 POU4F2 JASPAR yes 56335399
chr17 79550942 79550958 POU4F3 JASPAR yes 56335400
chr17 79550942 79550963 IRF1 JASPAR yes 56335401
chr17 79550945 79550949 YY1 TRANSFAC yes 56335402
chr17 79550948 79550969 IRF1 JASPAR yes 56335403
Genes associated with rs12942146[chr17:79550948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More