EnhancerDB
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  3. rs12943227[chr17:59414424]
Enhancers that have rs12943227[chr17:59414424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12943227[chr17:59414424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59414406 59414424 ESR2 JASPAR yes 55150307
chr17 59414410 59414424 TLX1 JASPAR yes 55150308
chr17 59414424 59414435 CEBPB JASPAR yes 55150309
chr17 59414424 59414437 ATF4 JASPAR yes 55150310
chr17 59414424 59414439 JUND JASPAR yes 55150311
Genes associated with rs12943227[chr17:59414424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More